miRBase entry: hcmv-mir-UL59

Stem-loop hcmv-mir-UL59


Accession
MI0024164
Description
Human cytomegalovirus hcmv-mir-UL59 precursor miRNA


Sequence

cgacgGUUCUCUCGCUCGUCAUGCCGUucugagcuccgacauggcggacgagagaaaauggcgucg
(((((.((((((((.((((((((.((..........)).)))))))).)))))))....).)))))

Structure
     G ----       C        C  Uucu 
cgacg U    UCUCUCG UCGUCAUG CG    g
||||| |    ||||||| |||||||| ||     
gcugc g    agagagc ggcgguac gc    a
     g uaaa       a        a  cucg 


Annotation confidence Not enough data
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Genome context
HEHCMVCG: 94602-94667 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from hcmv-mir-UL59
Name Accession Chromosome Start End Strand Confidence




Disease association
hcmv-mir-UL59 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hcmv-miR-UL59

Accession MIMAT0029122
Description Human cytomegalovirus hcmv-miR-UL59 mature miRNA
Sequence 6 - GUUCUCUCGCUCGUCAUGCCGU - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22715351
    The microRNA Transcriptome of Human Cytomegalovirus (HCMV)
    "Meshesha MK, Veksler-Lublinsky I, Isakov O, Reichenstein I, Shomron N, Kedem K, Ziv-Ukelson M, Bentwich Z, Avni YS"
    "Open Virol J (2012) 6:38-48