miRBase entry: ghr-MIR7486a

Stem-loop ghr-MIR7486a


Accession
MI0024169
Description
Gossypium hirsutum ghr-MIR7486a precursor miRNA
Gene family
MIPF0001682; MIR7486


Sequence

acgcuucuucAAGGAAGCGCUUUGUCCACGUGGAcagaauacgcguccuugagggcgcgcuuuguguccacauggacaaagcgcuuccuugaggaagcguuuucc
((((((((((((((((((((((((((((.(((((((.((..(((((((....)))))))..)).))))))).)))))))))))))))))))))))))))).....

Structure
-----                            C       g  ua       u 
     acgcuucuucAAGGAAGCGCUUUGUCCA GUGGAca aa  cgcgucc u
     |||||||||||||||||||||||||||| ||||||| ||  |||||||  
     ugcgaaggaguuccuucgcgaaacaggu caccugu uu  gcgcggg g
ccuuu                            a       g  uc       a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ghr-miR7486a

Accession MIMAT0029127
Description Gossypium hirsutum ghr-miR7486a mature miRNA
Sequence 11 - AAGGAAGCGCUUUGUCCACGUGGA - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22138860
    A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
    "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
    "Mol Plant (2012) 5:889-900