Stem-loop ghr-MIR7489

Accession

MI0024173

Description

Gossypium hirsutum ghr-MIR7489 precursor miRNA

Sequence

ugguaugggcAUUGUUGCCAAUACAGGAGAACGUggbucuuuuugacauaaugccuagaacuacccauagcuccaucccaacucauaaauaggaggauaagacugaauucacguccuccuauacugguaacaaugcgcaugccaa
(((((((.((((((((((((.....((((...((((.(((................))).))))......))))..............((((((((((..((......))..))))))))))..)))))))))))).))))))).

Structure

-       g            ---------------------------------------------AUACA    ---AAC    b   uuuugac 
 ugguaug gcAUUGUUGCCA                                                  GGAG      GUgg ucu       a
 ||||||| ||||||||||||                                                  ||||      |||| |||        
 accguac cguaacaauggu                                                  ccuc      cauc aga       u
a       g            cauauccuccugcacuuaagucagaauaggaggauaaauacucaacccua    gauacc    a   uccguaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ghr-miR7489

• Accession: MIMAT0029131
• Description: Gossypium hirsutum ghr-miR7489 mature miRNA
• Sequence: 11 - AUUGUUGCCAAUACAGGAGAACGU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900