miRBase entry: ghr-MIR7496a

Stem-loop ghr-MIR7496a


Accession
MI0024184
Description
Gossypium hirsutum ghr-MIR7496a precursor miRNA
Gene family
MIPF0001744; MIR7496


Sequence

ccuccauguuuacauauuuuguuaauuugaucuugauucuaaaaaacuaaacaaaauuagccucaacauuuacacauuuacaaaaauauuauaggcuaauuuuguuaaaucAUGACCAAAUUGAUAGAAUGUGUAaaauaggaga
.((((...(((((((((((((((((((((.((.(((((...........((((((((((((((.............................)))))))))))))).))))).)).)))))))))))))))))))))...)))).

Structure
c    aug                     a  u     cuaaaaaacua              caacauuuacaca 
 cucc   uuuacauauuuuguuaauuug uc ugauu           aacaaaauuagccu             u
 ||||   ||||||||||||||||||||| || |||||           ||||||||||||||             u
 gagg   aaAUGUGUAAGAUAGUUAAAC AG Acuaa           uuguuuuaaucgga             u
a    aua                     C  U     ----------a              uauuauaaaaaca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ghr-miR7496a

Accession MIMAT0029142
Description Gossypium hirsutum ghr-miR7496a mature miRNA
Sequence 112 - AUGACCAAAUUGAUAGAAUGUGUA - 135
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22138860
    A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
    "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
    "Mol Plant (2012) 5:889-900