Stem-loop ghr-MIR7497

Accession

MI0024186

Description

Gossypium hirsutum ghr-MIR7497 precursor miRNA

Sequence

uaaacaugauaacuugaaugacaaucuauauguacuucauguuaauuuuuuuugaauuuuuauaauuuuaaauauaaucuauuuuauaguuuuuaaaauuauuuguugacauggcauauaagacauaguaccaugucagcaugaaaguACAUGUGGACUGUCAUAUGGGUUguuacacuaa
......((((((((((.((((((.((((((((((((((((((.(((((.....)))))...((((((((((((((((......)))))...)))))))))))....((((((((..(((.....)))...))))))))))))).))))))))))))).)))))).))))))))))......

Structure

uaaaca          a      a             -     -----------------uaauuuuuuuugaauuuuu           ---     uc 
      ugauaacuug augaca ucuauauguacuu caugu                                    auaauuuuaaa   uauaa  u
      |||||||||| |||||| ||||||||||||| |||||                                    |||||||||||   |||||   
      auugUUGGGU UACUGU AGGUGUACAugaa guacg                                    uauuaaaauuu   auauu  a
aaucac          A      C             a     acuguaccaugauacagaauauacgguacaguuguu           uug     uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ghr-miR7497

• Accession: MIMAT0029144
• Description: Gossypium hirsutum ghr-miR7497 mature miRNA
• Sequence: 149 - ACAUGUGGACUGUCAUAUGGGUU - 171
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900