miRBase entry: ghr-MIR7502

Stem-loop ghr-MIR7502


Accession
MI0024191
Description
Gossypium hirsutum ghr-MIR7502 precursor miRNA
Gene family
MIPF0001869; MIR7502

Literature search
3 open access papers mention ghr-MIR7502
(8 sentences)

Sequence

uuguuaaaaaugucaucuauuuuuacuauuaaaaaguccuugcacauuagaauaagguacauguaacuguuuaguuauucuauagcaaugucaaUUUUUAACAGUAGAAAUGAAUGAAuuuauuacua
..((...((((.((((.((((((((((.(((((((..(.((((....((((((((...(((......)))....))))))))..)))).)....))))))).)))))))))).))))))))...))..

Structure
uu  uaa    g    c          a       --gu c    acau        -ggu   ug 
  gu   aaau ucau uauuuuuacu uuaaaaa    c uugc    uagaauaa    aca  u
  ||   |||| |||| |||||||||| |||||||    | ||||    ||||||||    |||   
  ca   uuuA AGUA GUAAAGAUGA AAUUUUU    g aacg    aucuuauu    ugu  a
au  uua    -    A          C       aacu u    --au        gauu   ca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ghr-miR7502

Accession MIMAT0029149
Description Gossypium hirsutum ghr-miR7502 mature miRNA
Sequence 95 - UUUUUAACAGUAGAAAUGAAUGAA - 118
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22138860
    A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
    "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
    "Mol Plant (2012) 5:889-900