Stem-loop ghr-MIR7506

Accession

MI0024195

Description

Gossypium hirsutum ghr-MIR7506 precursor miRNA

Gene family

MIPF0001999; MIR7506

Sequence

agagguccaauguuaagaccauguucuggacauugcguugcacagaugagagguccauguaagaacaAUGUCUGGGACAUGGCGUUGGCACugagaugaga
....(((((.((((((..(((((((((((((((((..(((((..(((.....)))..)))))...)))))))))))))))))..)))))).)).)))....

Structure

agag   -  a      ga                 -cg     ca   g 
    guc ca uguuaa  ccauguucuggacauug   uugca  gau a
    ||| || ||||||  |||||||||||||||||   |||||  ||| g
    uag gu ACGGUU  GGUACAGGGUCUGUAac   aaugu  cug a
agag   a  C      GC                 aag     ac   g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ghr-miR7506

• Accession: MIMAT0029153
• Description: Gossypium hirsutum ghr-miR7506 mature miRNA
• Sequence: 68 - AUGUCUGGGACAUGGCGUUGGCAC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900