miRBase entry: mes-MIR156b

Stem-loop mes-MIR156b


Accession
MI0024208
Description
Manihot esculenta mes-MIR156b precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
6 open access papers mention mes-MIR156b
(17 sentences)

Sequence

cUGACAGAAGAGAGUGAGCACacacaggcaauuguaugaggccauaccauugcagaggugugugcucaccucucuuucugucag
(((((((((((((((((((((((((..(((((.(((((....))))).)))))....))))))))))).))))).)))))))))

Structure
         -     -           --ag     u     a 
cUGACAGAA GAGAG UGAGCACacac    gcaau guaug g
||||||||| ||||| |||||||||||    ||||| |||||  
gacugucuu cucuc acucgugugug    cguua cauac g
         u     c           gaga     c     c 


Annotation confidence Not enough data
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Genome context
scaffold09822: 156961-157044 [-]

Database links

Mature mes-miR156b

Accession MIMAT0029166
Description Manihot esculenta mes-miR156b mature miRNA
Sequence 2 - UGACAGAAGAGAGUGAGCAC - 21
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269