Stem-loop mes-MIR156c

Accession

MI0024209

Description

Manihot esculenta mes-MIR156c precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

6 open access papers mention mes-MIR156c
(17 sentences)

Sequence

ggUGACAGAAGAGAGUGAGCACacaugguauuuucuugcaugaauucaugcucgaagcucugcgugcucacucucuagcugucacc
((((((((.(((((((((((((.((.(((...(((..(((((....)))))..)))))).)).)))))))))))))..))))))))

Structure

        -A             a  u   auu   uu     a 
ggUGACAG  AGAGAGUGAGCAC ca ggu   uuc  gcaug a
||||||||  ||||||||||||| || |||   |||  |||||  
ccacuguc  ucucucacucgug gu ucg   aag  cguac u
        ga             c  c   ---   cu     u 

Annotation confidence Not enough data

Genome context

scaffold07859: 647750-647835 [-]

Mature mes-miR156c

• Accession: MIMAT0029167
• Description: Manihot esculenta mes-miR156c mature miRNA
• Sequence: 3 - UGACAGAAGAGAGUGAGCAC - 22
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269