miRBase entry: mes-MIR156e

Stem-loop mes-MIR156e


Accession
MI0024211
Description
Manihot esculenta mes-MIR156e precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
6 open access papers mention mes-MIR156e
(18 sentences)

Sequence

gaaauUGACAGAAGAGAGUGAGCACacagaggcauuuguauaaaucuauacccuugcuuuugcgugcucacuucucuuucugucagcuuc
(((.(((((((((((((((((((((.((((((((...(((((....)))))...)))))))).)))))))).)))).))))))))).)))

Structure
   a         -    -        a        uuu     a 
gaa uUGACAGAA GAGA GUGAGCAC cagaggca   guaua a
||| ||||||||| |||| |||||||| ||||||||   |||||  
cuu gacugucuu cucu cacucgug guuuucgu   cauau u
   c         u    u        c        ucc     c 


Annotation confidence Not enough data
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Genome context
scaffold03049: 344166-344255 [+]

Database links

Mature mes-miR156e

Accession MIMAT0029169
Description Manihot esculenta mes-miR156e mature miRNA
Sequence 6 - UGACAGAAGAGAGUGAGCAC - 25
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269