Stem-loop mes-MIR160b

Accession

MI0024222

Description

Manihot esculenta mes-MIR160b precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

7 open access papers mention mes-MIR160b
(21 sentences)

Sequence

gUGCCUGGCUCCCUGUAUGCCAccugcaaagcucaucaaaaaguugguggcggccuccgcagguggcaugcgaggagccaugcau
((((.(((((((.((((((((((((((...(((((((((....))))))..)))....)))))))))))))).))))))).))))

Structure

    C       C              -aaa   --      a 
gUGC UGGCUCC UGUAUGCCAccugc    gcu  caucaa a
|||| ||||||| ||||||||||||||    |||  ||||||  
uacg accgagg gcguacgguggacg    cgg  gugguu a
    u       a              ccuc   cg      g 

Annotation confidence Not enough data

Genome context

scaffold02954: 10603-10687 [+]

Mature mes-miR160b

• Accession: MIMAT0029180
• Description: Manihot esculenta mes-miR160b mature miRNA
• Sequence: 2 - UGCCUGGCUCCCUGUAUGCCA - 22
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269