miRBase entry: mes-MIR160h

Stem-loop mes-MIR160h


Accession
MI0024228
Description
Manihot esculenta mes-MIR160h precursor miRNA
Gene family
MIPF0000032; MIR160

Literature search
7 open access papers mention mes-MIR160h
(20 sentences)

Sequence

augUGCCUGGCUCCCUGUAUGCCAUUugcagagcccaccggagaaucgauggccuccguggauggcguaugaggagccaugcauau
((((((.(((((((.((((((((((((((.(((.(((.((......)).))).))).)))))))))))))).))))))).))))))

Structure
      C       C              a   c   c  ga 
augUGC UGGCUCC UGUAUGCCAUUugc gag cca cg  g
|||||| ||||||| |||||||||||||| ||| ||| ||   
uauacg accgagg guaugcgguaggug cuc ggu gc  a
      u       a              c   c   a  ua 


Annotation confidence Not enough data
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Genome context
scaffold12004: 855175-855260 [+]

Database links

Mature mes-miR160h

Accession MIMAT0029186
Description Manihot esculenta mes-miR160h mature miRNA
Sequence 4 - UGCCUGGCUCCCUGUAUGCCAUU - 26
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269