Stem-loop mes-MIR164c

Accession

MI0024232

Description

Manihot esculenta mes-MIR164c precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

6 open access papers mention mes-MIR164c
(21 sentences)

Sequence

gggugggaagcuccugcUGGAGAAGCAGGGCACGUGCAaacuccauggcuucucaaaugccauucaucucuuuugcacgugcuccccuucuccaacauggucuccucaccc
(((((((.((..((((.((((((((..(((((((((((((....(((((.........)))))........)))))))))))))..)))))))).)).)).)).)))))))

Structure

       a  cu  -  c        CA             ----cucc     uuc 
ggguggg ag  cc ug UGGAGAAG  GGGCACGUGCAaa        auggc   u
||||||| ||  || || ||||||||  |||||||||||||        |||||   c
cccacuc uc  gg ac accucuuc  cucgugcacguuu        uaccg   a
       c  -u  u  a        cc             ucucuacu     uaa 

Annotation confidence Not enough data

Genome context

scaffold04457: 369765-369875 [+]

Mature mes-miR164c

• Accession: MIMAT0029190
• Description: Manihot esculenta mes-miR164c mature miRNA
• Sequence: 18 - UGGAGAAGCAGGGCACGUGCA - 38
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269