miRBase entry: mes-MIR164d

Stem-loop mes-MIR164d


Accession
MI0024233
Description
Manihot esculenta mes-MIR164d precursor miRNA
Gene family
MIPF0000045; MIR164

Literature search
6 open access papers mention mes-MIR164d
(22 sentences)

Sequence

ccaugcUGGAGAAGCAGGGCACAUGCUaaaucuaucagcauuauaaucugagaauuucgcaugugcccugauucuccagcuugg
(((.(((((((((.((((((((((((.((((...((((.((....))))))..)))).)))))))))))).))))))))).)))

Structure
   u         G            U    cua    c  u 
cca gcUGGAGAA CAGGGCACAUGC aaau   ucag au a
||| ||||||||| |||||||||||| ||||   |||| ||  
ggu cgaccucuu gucccguguacg uuua   aguc ua u
   u         a            c    -ag    -  a 


Annotation confidence Not enough data
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Genome context
scaffold06700: 167813-167896 [+]

Database links

Mature mes-miR164d

Accession MIMAT0029191
Description Manihot esculenta mes-miR164d mature miRNA
Sequence 7 - UGGAGAAGCAGGGCACAUGCU - 27
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269