miRBase entry: mes-MIR166a

Stem-loop mes-MIR166a


Accession
MI0024234
Description
Manihot esculenta mes-MIR166a precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
6 open access papers mention mes-MIR166a
(16 sentences)

Sequence

guugaggggaauguugucuggcucgaugucauucaugugaagcucaacguuaacugaugaaugauuUCGGACCAGGCUUCAUUCCCCccaac
((((.((((((((..((((((.((((.(((((((((....(((.....))).....))))))))).)))).))))))..)))))))).))))

Structure
    a        uu      c    u         -guga   u 
guug ggggaaug  gucugg ucga gucauucau     agc c
|||| ||||||||  |||||| |||| |||||||||     ||| a
caac CCCCUUAC  CGGACC GGCU uaguaagua     uug a
    c        UU      A    u         gucaa   c 


Annotation confidence Not enough data
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Genome context
scaffold11998: 298832-298923 [+]

Database links

Mature mes-miR166a

Accession MIMAT0029192
Description Manihot esculenta mes-miR166a mature miRNA
Sequence 67 - UCGGACCAGGCUUCAUUCCCC - 87
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269