Stem-loop mes-MIR166f

Accession

MI0024239

Description

Manihot esculenta mes-MIR166f precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

6 open access papers mention mes-MIR166f
(16 sentences)

Sequence

uugaggggaauguugucuggcucgaggccacuaacuagaucuaugauuuuaucucugaaaucauuaauuuaauucauuuucguuguugagauaugauuuaucaugaguuagugacgUCGGACCAGGCUUCAUUCCCCccaa
.((.((((((((..((((((.((((.(.((((((((.(((..(((((((((....)))))))))..)))(((.(((((((((....))))).)))).))).....)))))))).).)))).))))))..)))))))).)).

Structure

u  a        uu      c    g c        -----------------------------------a   cu         u 
 ug ggggaaug  gucugg ucga g cacuaacu                                    gau  augauuuua c
 || ||||||||  |||||| |||| | ||||||||                                    |||  |||||||||  
 ac CCCCUUAC  CGGACC GGCU c gugauuga                                    uua  uacuaaagu u
a  c        UU      A    g a        guacuauuuaguauagaguuguugcuuuuacuuaau   au         c 

Annotation confidence Not enough data

Genome context

scaffold00977: 63690-63830 [+]

Mature mes-miR166f

• Accession: MIMAT0029197
• Description: Manihot esculenta mes-miR166f mature miRNA
• Sequence: 117 - UCGGACCAGGCUUCAUUCCCC - 137
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269