Stem-loop mes-MIR166i

Accession

MI0024242

Description

Manihot esculenta mes-MIR166i precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

6 open access papers mention mes-MIR166i
(16 sentences)

Sequence

augguuguuuuugaagggaauguuggcuggcucuaggcauucacaagugugggagaagaaaucgaucagaagcaguggaagcuUUGGACCAGGCUUCAUUCCCCucaauauaauuaccau
(((((.(((.((((.(((((((..(.((((.(((((((.(((((...(.(((..((.....))..))).)....))))).)).))))))))).)..))))))).))))...))).)))))

Structure

     u   --u    a       uu g    c     -  a     -aag g   ga  a 
auggu guu   uuga gggaaug  g cugg ucuag gc uucac    u ugg  ga g
||||| |||   |||| |||||||  | |||| ||||| || |||||    | |||  || a
uacca uaa   aacu CCCUUAC  C GACC AGGUU cg aggug    a acu  cu a
     u   uau    C       UU G    -     u  a     acga g   ag  a 

Annotation confidence Not enough data

Genome context

scaffold05979: 357653-357772 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mes-MIR166i

Mature mes-miR166i

• Accession: MIMAT0029200
• Description: Manihot esculenta mes-miR166i mature miRNA
• Sequence: 84 - UUGGACCAGGCUUCAUUCCCC - 104
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269