miRBase entry: mes-MIR169f

Stem-loop mes-MIR169f


Accession
MI0024256
Description
Manihot esculenta mes-MIR169f precursor miRNA
Gene family
MIPF0000037; MIR169_2

Literature search
10 open access papers mention mes-MIR169f
(28 sentences)

Sequence

ggugUAGCCAAGGAUGACUUGCCGGaaaaacucuccauaaauuuucuggugauucaucuucgguuuuuaaucagaauuucggcaaguuguccuuggcuacauu
.((((((((((((((((((((((((((................(((((((.....(((...))).....))))))))))))))))))))))))))))))))).

Structure
g                          aaacucuccauaaauu       gauuc   u 
 gugUAGCCAAGGAUGACUUGCCGGaa                uucuggu     auc  
 ||||||||||||||||||||||||||                |||||||     ||| u
 uacaucgguuccuguugaacggcuuu                aagacua     ugg  
u                          ----------------       auuuu   c 


Annotation confidence Not enough data
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Genome context
scaffold04233: 350206-350308 [-]

Database links

Mature mes-miR169f

Accession MIMAT0029214
Description Manihot esculenta mes-miR169f mature miRNA
Sequence 5 - UAGCCAAGGAUGACUUGCCGG - 25
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269