Stem-loop mes-MIR169k

Accession

MI0024261

Description

Manihot esculenta mes-MIR169k precursor miRNA

Gene family

MIPF0001690; MIR169_7

Literature search

10 open access papers mention mes-MIR169k
(28 sentences)

Sequence

aGAGCCAAGAAUGACUUGCCGGauaaugauaagcuauauugcuacaaggcauaaaaaaaauaagcagcgggaagucauucuggcucu
(((((((.(((((((((.(((...............(((.(((....))))))..............))).))))))))))))))))

Structure

       A         G   Gauaaugauaagcua   u   a 
aGAGCCA GAAUGACUU CCG               uau gcu c
||||||| ||||||||| |||               ||| |||  
ucucggu cuuacugaa ggc               aua cgg a
       -         g   -gacgaauaaaaaaa   -   a 

Annotation confidence Not enough data

Genome context

scaffold12448: 20120-20206 [-]

Mature mes-miR169k

• Accession: MIMAT0029219
• Description: Manihot esculenta mes-miR169k mature miRNA
• Sequence: 2 - GAGCCAAGAAUGACUUGCCGG - 22
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269