Stem-loop mes-MIR171b

Accession

MI0024280

Description

Manihot esculenta mes-MIR171b precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

7 open access papers mention mes-MIR171b
(17 sentences)

Sequence

aauacgagauauuggugcgguucaaucugauagcagugcucuaugcauagagcuuuguuguuugaUUGAGCCGUGCCAAUAUCACGuauu
((((((.((((((((((((((((((((.((((((((.((((((....)))))).)))))))).)))))))))))))))))))).))))))

Structure

      a                    u        u      u 
aauacg gauauuggugcgguucaauc gauagcag gcucua g
|||||| |||||||||||||||||||| |||||||| ||||||  
uuauGC CUAUAACCGUGCCGAGUUag uuguuguu cgagau c
      A                    u        u      a 

Annotation confidence Not enough data

Genome context

scaffold06598: 144796-144885 [-]

Mature mes-miR171b

• Accession: MIMAT0029238
• Description: Manihot esculenta mes-miR171b mature miRNA
• Sequence: 66 - UUGAGCCGUGCCAAUAUCACG - 86
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269