Stem-loop mes-MIR171f

Accession

MI0024284

Description

Manihot esculenta mes-MIR171f precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

7 open access papers mention mes-MIR171f
(16 sentences)

Sequence

agaaagcgauguuggugagguucaauccgaagacggauuuacauauucagaauuguaaaagacgaucucAGAUUGAGCCGCGCCAAUAUCacuuucu
((((((.((((((((((.(((((((((.((.((((..((((((..........))))))...)).)))).))))))))).)))))))))).))))))

Structure

      c          a         c  a  -  -ga      uauu 
agaaag gauguuggug gguucaauc ga ga cg   uuuaca    c
|||||| |||||||||| ||||||||| || || ||   ||||||     
ucuuuc CUAUAACCGC CCGAGUUAG cu cu gc   aaaugu    a
      a          G         A  -  a  aga      uaag 

Annotation confidence Not enough data

Genome context

scaffold05760: 38935-39031 [+]

Mature mes-miR171f

• Accession: MIMAT0029242
• Description: Manihot esculenta mes-miR171f mature miRNA
• Sequence: 70 - AGAUUGAGCCGCGCCAAUAUC - 90
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269