Stem-loop mes-MIR171g

Accession

MI0024285

Description

Manihot esculenta mes-MIR171g precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

7 open access papers mention mes-MIR171g
(16 sentences)

Sequence

agaggugauguugggauggcucaaucaaaucaaaucucccaagguuuggguccuuuaaucUGAUUGAGCCGUGCCAAUAUCccucu
(((((.((((((((.((((((((((((.((.(((...(((((...)))))...))).)).)))))))))))).)))))))))))))

Structure

     u        g            a  c   ucu     g 
agagg gauguugg auggcucaauca au aaa   cccaa  
||||| |||||||| |||||||||||| || |||   ||||| g
ucucc CUAUAACC UGCCGAGUUAGU ua uuu   ggguu  
     -        G            c  a   ccu     u 

Annotation confidence Not enough data

Genome context

scaffold09876: 304317-304402 [+]

Mature mes-miR171g

• Accession: MIMAT0029243
• Description: Manihot esculenta mes-miR171g mature miRNA
• Sequence: 61 - UGAUUGAGCCGUGCCAAUAUC - 81
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269