Stem-loop mes-MIR319h

Accession

MI0024302

Description

Manihot esculenta mes-MIR319h precursor miRNA

Gene family

MIPF0000010; MIR159

Literature search

6 open access papers mention mes-MIR319h
(20 sentences)

Sequence

gagagagcuuccuucagcccacucauggaugggguuaaaggggcugaacuaucugccgacucauucauuugagcacuaguagacaaagaguuacuauuuuagcuacugugguugugugaaugaugcgggagauaauuuugcaucccucuuuuucugugCUUGGACUGAAGGGAGCUCCUc
(((.(((((((((((((.(((..((((((.((((....((((((.(((.(((((.(((..((((((((.(((.(((.(((((.(.((((.......)))).))))))))).))).))))))))..))).))))).))).))..)))))))).))))))..))).))))))))))))))))

Structure

   a             c   cu      u    uuaa    --  u   c     g   ac        u   g   u     a a    gu 
gag gagcuuccuucag cca  caugga gggg    aggg  gc gaa uaucu ccg  ucauucau uga cac aguag c aaga  u
||| ||||||||||||| |||  |||||| ||||    ||||  || ||| ||||| |||  |||||||| ||| ||| ||||| | ||||  a
cUC CUCGAGGGAAGUC GGU  gugucu uuuc    uccc  cg uuu auaga ggc  aguaagug guu gug ucauc g uuuu  c
   -             A   UC      u    ----    ua  u   a     g   gu        u   g   -     - a    au 

Annotation confidence Not enough data

Genome context

scaffold02877: 33218-33397 [-]

Mature mes-miR319h

• Accession: MIMAT0029260
• Description: Manihot esculenta mes-miR319h mature miRNA
• Sequence: 159 - CUUGGACUGAAGGGAGCUCCU - 179
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269