Stem-loop mes-MIR396f

Accession

MI0024320

Description

Manihot esculenta mes-MIR396f precursor miRNA

Gene family

MIPF0000047; MIR396

Literature search

3 open access papers mention mes-MIR396f
(13 sentences)

Sequence

ugucaugcuuUUCCACAGCUUUCUUGAACUUcuucuucuucuucuuguucuagcuggcuucuuauuucuuguugugugcauggcauucuuagaaguucaagaaagcugugggagaacauggca
(((((((.(((((((((((((((((((((((((.........((.(((.(((((................)))).).))).)).......))))))))))))))))))))))))).)))))))

Structure

       c                         ucuucuucu  u   u -    uggcuuc 
ugucaug uuUUCCACAGCUUUCUUGAACUUcu         uc ugu c uagc       u
||||||| |||||||||||||||||||||||||         || ||| | ||||        
acgguac agagggugucgaaagaacuugaaga         gg acg g guug       u
       a                         --uucuuac  u   u u    uucuuua 

Annotation confidence Not enough data

Genome context

scaffold04151: 82007-82129 [+]

Mature mes-miR396f

• Accession: MIMAT0029278
• Description: Manihot esculenta mes-miR396f mature miRNA
• Sequence: 11 - UUCCACAGCUUUCUUGAACUU - 31
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269