Stem-loop mes-MIR403b

Accession

MI0024329

Description

Manihot esculenta mes-MIR403b precursor miRNA

Gene family

MIPF0000290; MIR403

Sequence

aagagucaaaagaggaagaggcauauuucagguuugugcgugaaucuaauauagacauuuuucuuuccacaaaagaucguaaaauucucucuaggaucuugUUAGAUUCACGCACAAACUCGuaaucugccuuuucgauuauccucgucucucuu
(((((......((((((((((((.(((.(.((((((((((((((((((((..(((......)))........((((((.((..........)).)))))))))))))))))))))))))).).))).))))))).......)))))....)))))

Structure

     ucaaaa     -------       u   u a                    auagacauuuuucuuuccacaa      g  aaau 
aagag      gagga       agaggca auu c gguuugugcgugaaucuaau                      aagauc ua    u
|||||      |||||       ||||||| ||| | ||||||||||||||||||||                      |||||| ||     
uucuc      cuccu       uuuccgu uaa G UCAAACACGCACUUAGAUUg                      uucuag au    c
     --ucug     auuagcu       c   u C                    ----------------------      g  cucu 

Annotation confidence Not enough data

Genome context

scaffold00080: 55747-55901 [-]

Mature mes-miR403b

• Accession: MIMAT0029287
• Description: Manihot esculenta mes-miR403b mature miRNA
• Sequence: 102 - UUAGAUUCACGCACAAACUCG - 122
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269