Stem-loop mes-MIR477a

Accession

MI0024332

Description

Manihot esculenta mes-MIR477a precursor miRNA

Gene family

MIPF0000216; MIR477

Literature search

4 open access papers mention mes-MIR477a
(8 sentences)

Sequence

auuacucaCUCUCCCUCAAGGGCUUCUGugaguuucugguugaaauaccauacggaggacuuuagagagaguggauaau
((((.((((((((.((.((((.((((((((......((((......)))))))))))).)))))).)))))))).))))

Structure

    c        C  C    G        aguuuc    ug 
auua ucaCUCUC CU AAGG CUUCUGug      uggu  a
|||| |||||||| || |||| ||||||||      ||||   
uaau ggugagag ga uuuc ggaggcau      acca  a
    a        a  -    a        ------    ua 

Annotation confidence Not enough data

Genome context

scaffold06716: 23691-23769 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mes-MIR477a

Mature mes-miR477a

• Accession: MIMAT0029290
• Description: Manihot esculenta mes-miR477a mature miRNA
• Sequence: 9 - CUCUCCCUCAAGGGCUUCUG - 28
• Evidence: not_experimental

References

1. PubMed ID: 22388699
   Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
   "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
   "Mol Biotechnol (2013) 53:257-269