miRBase entry: mes-MIR2111b

Stem-loop mes-MIR2111b


Accession
MI0024349
Description
Manihot esculenta mes-MIR2111b precursor miRNA
Gene family
MIPF0000754; MIR2111


Sequence

gugaggauugggUAAUCUGCAUCCUGAGGUUUAgauuggcauaaaugauuuuggauaaucuagcccuugggaugcagauuaucucguccucau
((((((((.((((((((((((((((((((.((((((((...((((....))))..)))))))).)))))))))))))))))))).))))))))

Structure
        u                    U        gca    u 
gugaggau gggUAAUCUGCAUCCUGAGG UUAgauug   uaaa g
|||||||| |||||||||||||||||||| ||||||||   ||||  
uacuccug ucuauuagacguaggguucc gaucuaau   guuu a
        c                    c        -ag    u 


Annotation confidence Not enough data
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Genome context
scaffold06244: 124701-124793 [-]

Database links

Mature mes-miR2111b

Accession MIMAT0029307
Description Manihot esculenta mes-miR2111b mature miRNA
Sequence 13 - UAAUCUGCAUCCUGAGGUUUA - 33
Evidence not_experimental

References

  1. PubMed ID: 22388699
    Computational identification of microRNAs and their targets in cassava (Manihot esculenta Crantz.)
    "Patanun O, Lertpanyasampatha M, Sojikul P, Viboonjun U, Narangajavana J"
    "Mol Biotechnol (2013) 53:257-269