Stem-loop aja-mir-21

Accession

MI0024362

Description

Artibeus jamaicensis aja-mir-21 precursor miRNA

Gene family

MIPF0000060; mir-21

Sequence

guaccaccuugucggguagcuuaucagacugauguugacuguugacucucauggCAACAGCAGUCGAUGGGCUGUCcgacauucugguauc
((((((...((((((((((((((((.(((((.(((((.((((.((...))))))))))).)))))))))))))))))))))...)))))).

Structure

-      ccu                a     a     a    u  c 
 guacca   ugucggguagcuuauc gacug uguug cugu ga  
 ||||||   |||||||||||||||| ||||| ||||| |||| || u
 uauggu   acagcCUGUCGGGUAG CUGAC ACAAC ggua cu  
c      cuu                -     G     -    -  c 

Annotation confidence Not enough data

Genome context

Unknown

Mature aja-miR-21

• Accession: MIMAT0031140
• Description: Artibeus jamaicensis aja-miR-21 mature miRNA
• Sequence: 55 - CAACAGCAGUCGAUGGGCUGUC - 76
• Evidence: not_experimental

References

1. PubMed ID: 23166587
   Transcriptome sequencing and annotation for the Jamaican fruit bat (Artibeus jamaicensis)
   "Shaw TI, Srivastava A, Chou WC, Liu L, Hawkinson A, Glenn TC, Adams R, Schountz T"
   "PLoS One (2012) 7:e48472