miRBase entry: aja-mir-331

Stem-loop aja-mir-331


Accession
MI0024372
Description
Artibeus jamaicensis aja-mir-331 precursor miRNA
Gene family
MIPF0000199; mir-331


Sequence

gaguuugguuuuguuuggguuuguucuagguauggucccagggaucccagaucaaaccagGCCCCUGGGCCUAUCCUAGAAccaaccuaaac
............(((((((((.((((((((.((((.(((((((...((...........)).))))))).)))))))))))).)))))))))

Structure
gaguuugguuuu         u        u    u       auc  agau 
            guuuggguu guucuagg augg cccaggg   cc    c
            ||||||||| |||||||| |||| |||||||   ||    a
            caaauccaa cAAGAUCC UAUC GGGUCCC   Gg    a
------------         c        -    C       --C  acca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aja-miR-331

Accession MIMAT0031150
Description Artibeus jamaicensis aja-miR-331 mature miRNA
Sequence 61 - GCCCCUGGGCCUAUCCUAGAA - 81
Evidence not_experimental

References

  1. PubMed ID: 23166587
    Transcriptome sequencing and annotation for the Jamaican fruit bat (Artibeus jamaicensis)
    "Shaw TI, Srivastava A, Chou WC, Liu L, Hawkinson A, Glenn TC, Adams R, Schountz T"
    "PLoS One (2012) 7:e48472