Stem-loop lja-MIR167b

Accession

MI0024375

Description

Lotus japonicus lja-MIR167b precursor miRNA

Gene family

MIPF0000023; MIR167_1

Sequence

ucaugcaccacuaccaguUGAAGCUGCCAGCAUGAUCUuaacuucccuccaugguggggaaagaucagaucauguggcaguuucaccuuguuguugguugcauga
(((((((((((.((.((.(((((((((((.((((((((...(((((((.......)))).)))...))))))))))))))))))).)).)).).))).)))))))

Structure

       -   - u  c  u           G        uaa   -    cc 
ucaugca cca c ac ag UGAAGCUGCCA CAUGAUCU   cuu cccu  a
||||||| ||| | || || ||||||||||| ||||||||   ||| ||||  u
aguacgu ggu g ug uc acuuugacggu guacuaga   gaa gggg  g
       u   u u  u  c           -        cua   a    ug 

Annotation confidence Not enough data

Genome context

Chr5: 32089527-32089631 [-]

Mature lja-miR167b

• Accession: MIMAT0029312
• Description: Lotus japonicus lja-miR167b mature miRNA
• Sequence: 19 - UGAAGCUGCCAGCAUGAUCU - 38
• Evidence: experimental ; cloned [1], Northern [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154