miRBase entry: lja-MIR7519

Stem-loop lja-MIR7519


Accession
MI0024393
Description
Lotus japonicus lja-MIR7519 precursor miRNA


Sequence

cCAAAUUUUCUAAGUGGGCUAGCccgccaacccguuuucccgucaaaauauggguuggguugagcccaaauacuaaaagugg
(((..(((..((..((((((((((((...((((((.((........)).)))))))))))).))))))..))..)))..)))

Structure
   AA   UC  AG      -      cca      u  ccc 
cCA  UUU  UA  UGGGCU AGCccg   acccgu uu   g
|||  |||  ||  |||||| ||||||   |||||| ||    
ggu  aaa  au  acccga uugggu   ugggua aa   u
   ga   uc  aa      g      ---      u  aac 


Annotation confidence Not enough data
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Genome context
Chr1: 36038043-36038124 [+]

Database links

Mature lja-miR7519

Accession MIMAT0029334
Description Lotus japonicus lja-miR7519 mature miRNA
Sequence 2 - CAAAUUUUCUAAGUGGGCUAGC - 23
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23071252
    Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
    "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
    "Plant Physiol (2012) 160:2137-2154