miRBase entry: lja-MIR7520

Stem-loop lja-MIR7520


Accession
MI0024394
Description
Lotus japonicus lja-MIR7520 precursor miRNA


Sequence

cccuccacaaucaugaugucgucauccucuuccucccccaucaagaucucagugguagaGAGGGGGAAGGUGAUGACAUCaugauucuagaggg
(((((...((((((((((((((((((.(((((((((.((((..........))))..).)))))))).))))))))))))))))))...)))))

Structure
     cac                  c        - -c    caag 
cccuc   aaucaugaugucgucauc ucuuccuc c  ccau    a
|||||   |||||||||||||||||| |||||||| |  ||||     
gggag   uuaguaCUACAGUAGUGG AGGGGGAG g  ggug    u
     auc                  A        a au    acuc 


Annotation confidence Not enough data
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Genome context
Chr4: 27609544-27609637 [+]

Database links

Mature lja-miR7520

Accession MIMAT0029335
Description Lotus japonicus lja-miR7520 mature miRNA
Sequence 60 - GAGGGGGAAGGUGAUGACAUC - 80
Evidence experimental
cloned [1]

References

  1. PubMed ID: 23071252
    Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
    "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
    "Plant Physiol (2012) 160:2137-2154