Stem-loop lja-MIR7525

Accession

MI0024400

Description

Lotus japonicus lja-MIR7525 precursor miRNA

Sequence

AGGGCGUUUUGGUACAUGACUagagaaaaguguucucuuauguauuugagaacaaaucuuaaaguguagcauuagcauuugcaauaccagaaacguucucuuugguacccaugaguacgguuuuuuacagugaaguuggaaauguucu
((((((((((.(.((.(.(((..((((((.(((.(((....(((((.((((((...(((....((((.(((........))).)))).)))...))))))...)))))....))).))).))))))..))).).))).))))))))))

Structure

          G U  A G   ag      g   u   uuau     --u      aaa   uaaa    a   uua 
AGGGCGUUUU G AC U ACU  agaaaa ugu cuc    guauu   gagaac   ucu    gugu gca   g
|||||||||| | || | |||  |||||| ||| |||    |||||   ||||||   |||    |||| |||    
ucuuguaaag u ug a uga  uuuuuu gca gag    caugg   cucuug   aga    caua cgu   c
          g -  a g   ca      g   u   uacc     uuu      caa   ---c    a   uua 

Annotation confidence Not enough data

Genome context

Chr1: 13144818-13144965 [-]

Mature lja-miR7525

• Accession: MIMAT0029341
• Description: Lotus japonicus lja-miR7525 mature miRNA
• Sequence: 1 - AGGGCGUUUUGGUACAUGACU - 21
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154