Stem-loop lja-MIR7531

Accession

MI0024413

Description

Lotus japonicus lja-MIR7531 precursor miRNA

Sequence

aagguuagucuaaauucaugcaucgguuucCGUGUUUUCUUUCAUUCCCCAuuucauuccucccaaucaaacauaacauuaauuuucaaacauagcauuaauguuauguuuaguuggaagaacggaaagggagaaauaaagaaaauacggaaauugaggaagaaauuuauacuaaccuu
(((((((((.((((((..(...((((((((((((((((((((..((((((.((((.(((.(((.(((.(((((((((((((((((........)).))))))))))))))).)))))).))).)))).))).)))..))))))))))))))))))))...)..)))))).)))))))))

Structure

         c      ca gca                    CA   -   A    a   c   c   c               -  uca 
aagguuagu uaaauu  u   ucgguuucCGUGUUUUCUUU  UUC CCC uuuc uuc ucc aau aaacauaacauuaau uu   a
||||||||| ||||||  |   ||||||||||||||||||||  ||| ||| |||| ||| ||| ||| ||||||||||||||| ||    
uuccaauca auuuaa  a   aguuaaaggcauaaaagaaa  aag ggg aagg aag agg uug uuuguauuguaauua ga   a
         u      ag agg                    ua   a   a    c   a   -   a               c  uac 

Annotation confidence Not enough data

Genome context

Chr2: 8841310-8841488 [-]

Mature lja-miR7531

• Accession: MIMAT0029354
• Description: Lotus japonicus lja-miR7531 mature miRNA
• Sequence: 31 - CGUGUUUUCUUUCAUUCCCCA - 51
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154