Stem-loop lja-MIR7538

Accession

MI0024423

Description

Lotus japonicus lja-MIR7538 precursor miRNA

Sequence

gggagauggaucaguaaacaUCAACGGAGAGCUUGCUGUCaagaggaaaacugggacauggagagcaugcuucuuuguuguaggugauaaucuccu
(((((((..((((.(......(((((((((((.((((.((...((.....))........)).)))).)).)))))))))..).)))).)))))))

Structure

       gg    g aaacaU         -  U    G  -----aag  g 
gggagau  auca u      CAACGGAGA GC UGCU UC        ag a
|||||||  |||| |      ||||||||| || |||| ||        || a
uccucua  uagu g      guuguuucu cg acga ag        uc a
       -a    g ----au         u  u    g  guacaggg  a 

Annotation confidence Not enough data

Genome context

Chr4: 1987707-1987802 [-]

Mature lja-miR7538

• Accession: MIMAT0029364
• Description: Lotus japonicus lja-miR7538 mature miRNA
• Sequence: 21 - UCAACGGAGAGCUUGCUGUC - 40
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154