Stem-loop lja-MIR7540b

Accession

MI0024426

Description

Lotus japonicus lja-MIR7540b precursor miRNA

Gene family

MIPF0001846; MIR7540

Sequence

ucuuucacguuauuucucuauuuucuccaacacucuccaccucuugaaauuuaagaaggaaaaaagugaaaugagUGAUAUGAUAAGUGAUGUGAuaga
(((.(((((((((((.((((((..(((...((((.....((((((((...))))).))).....))))....))).)))).)).))))))))))).)))

Structure

   u           c  -    uu   -caa    cucca   -     a 
ucu ucacguuauuu uc uauu  cuc    cacu     ccu cuuga  
||| ||||||||||| || ||||  |||    ||||     ||| ||||| a
aga AGUGUAGUGAA AG AUAG  gag    guga     gga gaauu  
   u           U  U    -U   uaaa    aaaaa   a     u 

Annotation confidence Not enough data

Genome context

Chr6: 2757358-2757456 [-]

Mature lja-miR7540b

• Accession: MIMAT0029367
• Description: Lotus japonicus lja-miR7540b mature miRNA
• Sequence: 76 - UGAUAUGAUAAGUGAUGUGA - 95
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 23071252
   Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus
   "De Luis A, Markmann K, Cognat V, Holt DB, Charpentier M, Parniske M, Stougaard J, Voinnet O"
   "Plant Physiol (2012) 160:2137-2154