Stem-loop ipu-let-7a-1

Accession

MI0024434

Description

Ictalurus punctatus ipu-let-7a-1 precursor miRNA

Literature search

1 open access papers mention ipu-let-7a-1
(6 sentences)

Sequence

UGAGGUAGUAGGUUGUAUAGUUuuagggucacacccacacugggagauaacuauacaaccuacugucuuucu
.(((((((((((((((((((((.....(((...((((...)))).))))))))))))))))))))))))...

Structure

--U                     uuagg   aca    c 
   GAGGUAGUAGGUUGUAUAGUU     guc   ccca  
   |||||||||||||||||||||     |||   |||| a
   uucugucauccaacauaucaa     uag   gggu  
ucu                     -----   --a    c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-let-7a

• Accession: MIMAT0029374
• Description: Ictalurus punctatus ipu-let-7a mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174