miRBase entry: ipu-let-7a-6

Stem-loop ipu-let-7a-6


Accession
MI0024437
Description
Ictalurus punctatus ipu-let-7a-6 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
1 open access papers mention ipu-let-7a-6
(6 sentences)

Sequence

UGAGGUAGUAGGUUGUAUAGUUugugggaaggaucacauccuauucaggugauaacuauacagucuauugccuucc
.((((((((((((((((((((((.((((.(((((...))))).)))).)....)))))))))))))))))))))..

Structure
-U                     ---- g    a     c 
  GAGGUAGUAGGUUGUAUAGUU    u uggg aggau  
  |||||||||||||||||||||    | |||| ||||| a
  uuccguuaucugacauaucaa    g acuu uccua  
cc                     uagu g    a     c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-let-7a

Accession MIMAT0029374
Description Ictalurus punctatus ipu-let-7a mature miRNA
Sequence 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174