miRBase entry: ipu-let-7b-1

Stem-loop ipu-let-7b-1


Accession
MI0024441
Description
Ictalurus punctatus ipu-let-7b-1 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
1 open access papers mention ipu-let-7b-1
(5 sentences)

Sequence

UGAGGUAGUAGGUUGUGUGGUuucaggguuguguuuuugccccaucaggaguuaacuauacaaccuacugccuuccc
.(((((((((((((((((((((((..(((.(.((....)).).)))..))...)))))))))))))))))))))...

Structure
--U                     ---  ag   u u  u 
   GAGGUAGUAGGUUGUGUGGUu   uc  ggu g gu u
   |||||||||||||||||||||   ||  ||| | ||  
   uuccgucauccaacauaucaa   ag  cua c cg u
ccc                     uug  ga   c c  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-let-7b

Accession MIMAT0029375
Description Ictalurus punctatus ipu-let-7b mature miRNA
Sequence 1 - UGAGGUAGUAGGUUGUGUGGU - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174