Stem-loop ipu-let-7c-1

Accession

MI0024442

Description

Ictalurus punctatus ipu-let-7c-1 precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

1 open access papers mention ipu-let-7c-1
(5 sentences)

Sequence

UGAGGUAGUAGGUUGUAUGGUUuagaauuuugcccugggaguuaacuguacaaccuucuagcuuucc
.(((.(((.(((((((((((((...((((((......))))))))))))))))))).))).)))...

Structure

--U   G   U             uag      gc 
   GAG UAG AGGUUGUAUGGUU   aauuuu  c
   ||| ||| |||||||||||||   ||||||   
   uuc auc uccaacaugucaa   uugagg  c
ccu   g   u             ---      gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-let-7c

• Accession: MIMAT0029376
• Description: Ictalurus punctatus ipu-let-7c mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUGGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174