Stem-loop ipu-mir-1-1

Accession

MI0024455

Description

Ictalurus punctatus ipu-mir-1-1 precursor miRNA

Gene family

MIPF0000038; mir-1

Sequence

ACAUACUUCUUUAUAUGCCCAUAugaacaagagcagcuauggaauguaaagaaguauguau
((((((((((((((((..(((((((........))..))))).))))))))))))))))..

Structure

--                GC     --  aac 
  ACAUACUUCUUUAUAU  CCAUA  ug   a
  ||||||||||||||||  |||||  ||    
  uguaugaagaaaugua  gguau  ac   a
ua                -a     cg  gag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-1

• Accession: MIMAT0029384
• Description: Ictalurus punctatus ipu-miR-1 mature miRNA
• Sequence: 1 - ACAUACUUCUUUAUAUGCCCAUA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174