Stem-loop ipu-mir-100-2

Accession

MI0024457

Description

Ictalurus punctatus ipu-mir-100-2 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

AACCCGUAGAUCCGAACUUGUGgugucucugugcacaagcucgugucuauagguaugu
.(((.((((((.(((.((((((...........)))))).))).)))))).)))....

Structure

---A   C      C   A      gugu 
    ACC GUAGAU CGA CUUGUG    c
    ||| |||||| ||| ||||||    u
    ugg uaucug gcu gaacac    c
ugua   a      u   c      gugu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-100

• Accession: MIMAT0029385
• Description: Ictalurus punctatus ipu-miR-100 mature miRNA
• Sequence: 1 - AACCCGUAGAUCCGAACUUGUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174