Stem-loop ipu-mir-107b

Accession

MI0024463

Description

Ictalurus punctatus ipu-mir-107b precursor miRNA

Gene family

MIPF0000024; mir-103

Sequence

cuucucuacaguguugccuuguagccuggugaucaAGCAGCAUUGUACAGGGCU
.((((.(((((((((((.(((..((...))...)))))))))))))).))))..

Structure

-c    c           c   -ua  c 
  uucu uacaguguugc uug   gc  
  |||| ||||||||||| |||   || u
  GGGA AUGUUACGACG Aac   ug  
UC    C           -   uag  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-107b

• Accession: MIMAT0029390
• Description: Ictalurus punctatus ipu-miR-107b mature miRNA
• Sequence: 36 - AGCAGCAUUGUACAGGGCU - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174