miRBase entry: ipu-mir-122

Stem-loop ipu-mir-122


Accession
MI0024469
Description
Ictalurus punctatus ipu-mir-122 precursor miRNA
Gene family
MIPF0000095; mir-122


Sequence

UGGAGUGUGACAAUGGUGUUUguaucaucugucgucaaacgccauuaucacacua
...(((((((.(((((((((((.............))))))))))).))))))).

Structure
UGG       C           uauca 
   AGUGUGA AAUGGUGUUUg     u
   ||||||| |||||||||||     c
   ucacacu uuaccgcaaac     u
--a       a           ugcug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-122

Accession MIMAT0029395
Description Ictalurus punctatus ipu-miR-122 mature miRNA
Sequence 1 - UGGAGUGUGACAAUGGUGUUU - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174