miRBase entry: ipu-mir-125b-1

Stem-loop ipu-mir-125b-1


Accession
MI0024477
Description
Ictalurus punctatus ipu-mir-125b-1 precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

UCCCUGAGACCCUAACUUGUGAcguuuuccuguuaugugcacggguuagguucuugggagcu
((((.((((.(((((((((((((((.........)))).))))))))))).))))))))...

Structure
---    U    C           -    uuu 
   UCCC GAGA CCUAACUUGUG Acgu   c
   |||| |||| ||||||||||| ||||   c
   aggg uucu ggauugggcac ugua   u
ucg    -    u           g    uug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-125b

Accession MIMAT0029398
Description Ictalurus punctatus ipu-miR-125b mature miRNA
Sequence 1 - UCCCUGAGACCCUAACUUGUGA - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174