Stem-loop ipu-mir-125b-3

Accession

MI0024479

Description

Ictalurus punctatus ipu-mir-125b-3 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

UCCCUGAGACCCUAACUUGUGAgcuuugugugcuaaaaaucacagguuaagcucuugggaccu
..(((((((.(.((((((((((..((((.....))))..)))))))))).).)))))))....

Structure

--UC       C C          gc    u 
    CCUGAGA C UAACUUGUGA  uuug g
    ||||||| | ||||||||||  |||| u
    ggguucu g auuggacacu  aaau g
ucca       c a          aa    c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-125b

• Accession: MIMAT0029398
• Description: Ictalurus punctatus ipu-miR-125b mature miRNA
• Sequence: 1 - UCCCUGAGACCCUAACUUGUGA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174