miRBase entry: ipu-mir-133a

Stem-loop ipu-mir-133a


Accession
MI0024493
Description
Ictalurus punctatus ipu-mir-133a precursor miRNA
Gene family
MIPF0000029; mir-133


Sequence

agcugguaaaauggaaccaaaucaacuguuuuauggauUUGGUCCCCUUCAACCAGCUGU
(((((((..((.((.((((((((............)))))))).)).))..)))))))..

Structure
--       aa  u  a        aacug 
  agcuggu  aa gg accaaauc     u
  |||||||  || || ||||||||      
  UCGACCA  UU CC UGGUUuag     u
UG       AC  C  C        guauu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ipu-miR-133a

Accession MIMAT0029407
Description Ictalurus punctatus ipu-miR-133a mature miRNA
Sequence 39 - UUGGUCCCCUUCAACCAGCUGU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23342099
    Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
    Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
    PLoS One (2013) 8:e54174