Stem-loop ipu-mir-135a

Accession

MI0024496

Description

Ictalurus punctatus ipu-mir-135a precursor miRNA

Gene family

MIPF0000028; mir-135

Sequence

UAUGGCUUUUUAUUCCUAUGUGAaggugaacaaggcucauguagggauacaagccacuaaa
..((((((..(((((((((((((.(.(......).)))))))))))))).)))))).....

Structure

---UA      UU             a g ga 
     UGGCUU  UAUUCCUAUGUGA g u  a
     ||||||  ||||||||||||| | |   
     accgaa  auagggauguacu c g  c
aaauc      -c             - g aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-135a

• Accession: MIMAT0029410
• Description: Ictalurus punctatus ipu-miR-135a mature miRNA
• Sequence: 1 - UAUGGCUUUUUAUUCCUAUGUGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174