Stem-loop ipu-mir-135c-1

Accession

MI0024498

Description

Ictalurus punctatus ipu-mir-135c-1 precursor miRNA

Gene family

MIPF0000028; mir-135

Sequence

UAUGGCUUUCUAUUCCUAUGUGAuuuucuucugccgugucacauaggguucaaagccauugg
.((((((((....(((((((((((.............)))))))))))...))))))))...

Structure

--U        CUAU           uuucu 
   AUGGCUUU    UCCUAUGUGAu     u
   ||||||||    |||||||||||     c
   uaccgaaa    gggauacacug     u
ggu        -cuu           ugccg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-135c

• Accession: MIMAT0029412
• Description: Ictalurus punctatus ipu-miR-135c mature miRNA
• Sequence: 1 - UAUGGCUUUCUAUUCCUAUGUGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174