Stem-loop ipu-mir-16b

Accession

MI0024522

Description

Ictalurus punctatus ipu-mir-16b precursor miRNA

Gene family

MIPF0000006; mir-15

Literature search

1 open access papers mention ipu-mir-16b
(2 sentences)

Sequence

UAGCAGCACGUAAAUAUUGGAGucaaagcacuugcgaauccuccaguauugaccgugcugcu
.(((((((((..((((((((((.....((....)).....))))))))))...)))))))))

Structure

U         -UA          ucaaa  a 
 AGCAGCACG   AAUAUUGGAG     gc c
 |||||||||   ||||||||||     ||  
 ucgucgugc   uuaugaccuc     cg u
-         cag          cuaag  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-16b

• Accession: MIMAT0029432
• Description: Ictalurus punctatus ipu-miR-16b mature miRNA
• Sequence: 1 - UAGCAGCACGUAAAUAUUGGAG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174